19 lines
544 B
Bash
Executable file
19 lines
544 B
Bash
Executable file
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SIF_DIR=$1
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TOOL=$2
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if [[ -z "${SIF_DIR}" ]]; then
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echo MISSING SIF_DIR parameter
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echo 'usage: ./quick_test_tool.sh SID_DIR TOOL'
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exit 1
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fi
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if [[ -z "${TOOL}" ]]; then
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echo MISSING TOOL parameter
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echo 'usage: ./quick_test_tool.sh SID_DIR TOOL'
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exit 1
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fi
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mkdir -p "/tmp/RASTA/${TOOL}"
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while read apk; do
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python grunt-worker.py --base-dir "/tmp/RASTA/${TOOL}" --no-mark-done --keep-tmp-dir --no-write-to-couch --manual --task ${TOOL} --sha ${apk} --singularity --image-basedir ${SIF_DIR}
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done <"apks_${TOOL}.txt"
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